HL_6ENF_015

3D structure

PDB id

6ENF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a polyproline-stalled ribosome in the absence of EF-P

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CUUAGG

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ENF_015 not in the Motif Atlas

Geometric match to HL_4V88_190

Geometric discrepancy: 0.3661

The information below is about HL_4V88_190

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91015.1

Basepair signature

cWW-cWH-F

Number of instances in this motif group

4

Unit IDs

6ENF|1|A|C|544
6ENF|1|A|U|545
6ENF|1|A|U|546
6ENF|1|A|A|547
6ENF|1|A|G|548
6ENF|1|A|G|549

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain J

50S ribosomal protein L13

Chain R

50S ribosomal protein L21