HL_6ERI_018
3D structure
- PDB id
- 6ERI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the chloroplast ribosome with chl-RRF and hibernation-promoting factor
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- UGUUGAAGAA
- Length
- 10 nucleotides
- Bulged bases
- 6ERI|1|AA|A|584
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6ERI_018 not in the Motif Atlas
- Homologous match to HL_7RQB_018
- Geometric discrepancy: 0.2203
- The information below is about HL_7RQB_018
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_41998.1
- Basepair signature
- cWW-tWH-F-F-F
- Number of instances in this motif group
- 69
Unit IDs
6ERI|1|AA|U|576
6ERI|1|AA|G|577
6ERI|1|AA|U|578
6ERI|1|AA|U|579
6ERI|1|AA|G|580
6ERI|1|AA|A|581
6ERI|1|AA|A|582
6ERI|1|AA|G|583
6ERI|1|AA|A|584
6ERI|1|AA|A|585
Current chains
- Chain AA
- 23S ribosomal RNA
Nearby chains
- Chain AD
- 50S ribosomal protein L3, chloroplastic
- Chain AL
- 50S ribosomal protein L15, chloroplastic
- Chain AQ
- 50S ribosomal protein L20, chloroplastic
- Chain AR
- 50S ribosomal protein L21, chloroplastic
- Chain Aa
- 50S ribosomal protein L32, chloroplastic
Coloring options: