HL_6ERI_087
3D structure
- PDB id
- 6ERI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the chloroplast ribosome with chl-RRF and hibernation-promoting factor
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CGGUGAAAUG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6ERI_087 not in the Motif Atlas
- Homologous match to HL_4LFB_015
- Geometric discrepancy: 0.1224
- The information below is about HL_4LFB_015
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_38491.2
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 12
Unit IDs
6ERI|1|BA|C|638
6ERI|1|BA|G|639
6ERI|1|BA|G|640
6ERI|1|BA|U|641
6ERI|1|BA|G|642
6ERI|1|BA|A|643
6ERI|1|BA|A|644
6ERI|1|BA|A|645
6ERI|1|BA|U|646
6ERI|1|BA|G|647
Current chains
- Chain BA
- 16S ribosomal RNA
Nearby chains
- Chain AA
- Large subunit ribosomal RNA; LSU rRNA
- Chain BG
- 30S ribosomal protein S7, chloroplastic
- Chain BK
- 30S ribosomal protein S11, chloroplastic
- Chain BU
- 30S ribosomal protein S21, chloroplastic
- Chain BV
- Ribosome-binding factor PSRP1, chloroplastic
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