HL_6FRK_028
3D structure
- PDB id
- 6FRK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a prehandover mammalian ribosomal SRP and SRP receptor targeting complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- ACGUGCAAAU
- Length
- 10 nucleotides
- Bulged bases
- 6FRK|1|5|U|1596, 6FRK|1|5|A|1600, 6FRK|1|5|A|1601
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6FRK_028 not in the Motif Atlas
- Homologous match to HL_5TBW_020
- Geometric discrepancy: 0.0858
- The information below is about HL_5TBW_020
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_39334.8
- Basepair signature
- cWW-cWS-tSW-F-F
- Number of instances in this motif group
- 7
Unit IDs
6FRK|1|5|A|1593
6FRK|1|5|C|1594
6FRK|1|5|G|1595
6FRK|1|5|U|1596
6FRK|1|5|G|1597
6FRK|1|5|C|1598
6FRK|1|5|A|1599
6FRK|1|5|A|1600
6FRK|1|5|A|1601
6FRK|1|5|U|1602
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain B
- Ribosomal protein uL3
- Chain P
- Ribosomal protein uL22
- Chain j
- Ribosomal protein L37
Coloring options: