HL_6GZX_024

3D structure

PDB id

6GZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (ice)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.57 Å

Loop

Sequence

GGCCCACCAGC

Length

11 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6GZX_024 not in the Motif Atlas

Geometric match to HL_6TQA_003

Geometric discrepancy: 0.3636

The information below is about HL_6TQA_003

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_56334.1

Basepair signature

cWW-F

Number of instances in this motif group

16

Unit IDs

6GZX|1|A1|G|931
6GZX|1|A1|G|932
6GZX|1|A1|C|933
6GZX|1|A1|C|934
6GZX|1|A1|C|935
6GZX|1|A1|A|936
6GZX|1|A1|C|937
6GZX|1|A1|C|938
6GZX|1|A1|A|939
6GZX|1|A1|G|940
6GZX|1|A1|C|941

Current chains

Chain A1

23S ribosomal RNA

Nearby chains

Chain M3

30S ribosomal protein S13