HL_6GZX_204
3D structure
- PDB id
- 6GZX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T. thermophilus hibernating 100S ribosome (ice)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.57 Å
Loop
- Sequence
- UUUACCAAAAA
- Length
- 11 nucleotides
- Bulged bases
- 6GZX|1|A1|A|1813, 6GZX|1|A1|C|1814, 6GZX|1|A1|C|1815, 6GZX|1|A1|A|1816, 6GZX|1|A1|A|1819
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6GZX_204 not in the Motif Atlas
- Homologous match to HL_4WF9_043
- Geometric discrepancy: 0.2804
- The information below is about HL_4WF9_043
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_87681.1
- Basepair signature
- cWW-cWW-tWH-F-tWH-F-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
6GZX|1|A1|U|1810
6GZX|1|A1|U|1811
6GZX|1|A1|U|1812
6GZX|1|A1|A|1813
6GZX|1|A1|C|1814
6GZX|1|A1|C|1815
6GZX|1|A1|A|1816
6GZX|1|A1|A|1817
6GZX|1|A1|A|1818
6GZX|1|A1|A|1819
6GZX|1|A1|A|1820
Current chains
- Chain A1
- 23S ribosomal RNA
Nearby chains
- Chain C1
- 50S ribosomal protein L2
- Chain R1
- 50S ribosomal protein L22
- Chain c1
- 50S ribosomal protein L34
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