HL_6GZZ_017
3D structure
- PDB id
- 6GZZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T. thermophilus hibernating 100S ribosome (amc)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.13 Å
Loop
- Sequence
- UAUUGAAGCA
- Length
- 10 nucleotides
- Bulged bases
- 6GZZ|1|A1|C|599
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6GZZ_017 not in the Motif Atlas
- Homologous match to HL_7RQB_018
- Geometric discrepancy: 0.1822
- The information below is about HL_7RQB_018
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_41998.1
- Basepair signature
- cWW-tWH-F-F-F
- Number of instances in this motif group
- 69
Unit IDs
6GZZ|1|A1|U|591
6GZZ|1|A1|A|592
6GZZ|1|A1|U|593
6GZZ|1|A1|U|594
6GZZ|1|A1|G|595
6GZZ|1|A1|A|596
6GZZ|1|A1|A|597
6GZZ|1|A1|G|598
6GZZ|1|A1|C|599
6GZZ|1|A1|A|600
Current chains
- Chain A1
- 23S ribosomal RNA
Nearby chains
- Chain D1
- 50S ribosomal protein L3
- Chain K1
- 50S ribosomal protein L15
- Chain Q1
- 50S ribosomal protein L21
- Chain a1
- 50S ribosomal protein L32
Coloring options: