HL_6H58_186
3D structure
- PDB id
- 6H58 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - Full 100S Hibernating E. coli Ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 7.9 Å
Loop
- Sequence
- CGGUGAAAUG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6H58_186 not in the Motif Atlas
- Homologous match to HL_4LFB_015
- Geometric discrepancy: 0.0988
- The information below is about HL_4LFB_015
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_38491.2
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 12
Unit IDs
6H58|1|aa|C|689
6H58|1|aa|G|690
6H58|1|aa|G|691
6H58|1|aa|U|692
6H58|1|aa|G|693
6H58|1|aa|A|694
6H58|1|aa|A|695
6H58|1|aa|A|696
6H58|1|aa|U|697
6H58|1|aa|G|698
Current chains
- Chain aa
- 16S ribosomal RNA
Nearby chains
- Chain AA
- Large subunit ribosomal RNA; LSU rRNA
- Chain gg
- 30S ribosomal protein S7
- Chain kk
- 30S ribosomal protein S11
- Chain uu
- 30S ribosomal protein S21
- Chain vv
- Ribosome modulation factor
- Chain ww
- Transfer RNA; tRNA
- Chain xx
- Ribosome hibernation promoting factor
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