HL_6HCQ_105
3D structure
- PDB id
- 6HCQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the rabbit collided di-ribosome (collided monosome)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.5 Å
Loop
- Sequence
- GACUCAACAC
- Length
- 10 nucleotides
- Bulged bases
- 6HCQ|1|A2|A|1253
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6HCQ_105 not in the Motif Atlas
- Homologous match to HL_4V88_212
- Geometric discrepancy: 0.1895
- The information below is about HL_4V88_212
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50779.1
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
6HCQ|1|A2|G|1245
6HCQ|1|A2|A|1246
6HCQ|1|A2|C|1247
6HCQ|1|A2|U|1248
6HCQ|1|A2|C|1249
6HCQ|1|A2|A|1250
6HCQ|1|A2|A|1251
6HCQ|1|A2|C|1252
6HCQ|1|A2|A|1253
6HCQ|1|A2|C|1254
Current chains
- Chain A2
- 18S ribosomal RNA
Nearby chains
- Chain 33
- Transfer RNA; tRNA
- Chain R2
- Ribosomal protein S16
- Chain V2
- uS10
- Chain e2
- uS14
- Chain q3
- Transfer RNA; tRNA
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