HL_6HRM_043
3D structure
- PDB id
- 6HRM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S d2d8 stapled ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.96 Å
Loop
- Sequence
- ACACGUGGUAU
- Length
- 11 nucleotides
- Bulged bases
- 6HRM|1|1|G|1892, 6HRM|1|1|G|1895
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6HRM_043 not in the Motif Atlas
- Geometric match to HL_5J7L_145
- Geometric discrepancy: 0.0854
- The information below is about HL_5J7L_145
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_91503.7
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
6HRM|1|1|A|1888
6HRM|1|1|C|1889
6HRM|1|1|A|1890
6HRM|1|1|C|1891
6HRM|1|1|G|1892
6HRM|1|1|U|1893
6HRM|1|1|G|1894
6HRM|1|1|G|1895
6HRM|1|1|U|1896
6HRM|1|1|A|1897
6HRM|1|1|U|1898
Current chains
- Chain 1
- stapled 16S-23S rRNA,stapled 16S-23S rRNA,stapled 16S-23S rRNA,stapled 16S-23S rRNA
Nearby chains
- Chain X
- 50S ribosomal protein L28
Coloring options: