HL_6HTQ_005

3D structure

PDB id

6HTQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Stringent response control by a bifunctional RelA enzyme in the presence and absence of the ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.5 Å

Loop

Sequence

UGAAUUCAUAG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6HTQ_005 not in the Motif Atlas

Homologous match to HL_5J7L_138

Geometric discrepancy: 0.2629

The information below is about HL_5J7L_138

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_68257.1

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

2

Unit IDs

6HTQ|1|A|U|159
6HTQ|1|A|G|160
6HTQ|1|A|A|161
6HTQ|1|A|A|162
6HTQ|1|A|U|163
6HTQ|1|A|U|164
6HTQ|1|A|C|165
6HTQ|1|A|A|166
6HTQ|1|A|U|167
6HTQ|1|A|A|168
6HTQ|1|A|G|169

Current chains

Chain A

23S ribosomal RNA

Nearby chains