HL_6HTQ_040

3D structure

PDB id

6HTQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Stringent response control by a bifunctional RelA enzyme in the presence and absence of the ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.5 Å

Loop

Sequence

AGAGAAU

Length

7 nucleotides

Bulged bases

6HTQ|1|A|A|1679

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6HTQ_040 not in the Motif Atlas

Homologous match to HL_5J7L_174

Geometric discrepancy: 0.3127

The information below is about HL_5J7L_174

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

6HTQ|1|A|A|1675
6HTQ|1|A|G|1676
6HTQ|1|A|A|1677
6HTQ|1|A|G|1678
6HTQ|1|A|A|1679
6HTQ|1|A|A|1680
6HTQ|1|A|U|1681

Current chains

Chain A

23S ribosomal RNA

Nearby chains