HL_6HTQ_095

3D structure

PDB id

6HTQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Stringent response control by a bifunctional RelA enzyme in the presence and absence of the ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.5 Å

Loop

Sequence

GUUAAGUC

Length

8 nucleotides

Bulged bases

6HTQ|1|a|G|1104

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6HTQ_095 not in the Motif Atlas

Homologous match to HL_5J7L_024

Geometric discrepancy: 0.1557

The information below is about HL_5J7L_024

Detailed Annotation

T-loop related

Broad Annotation

T-loop

Motif group

HL_77436.5

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

23

Unit IDs

6HTQ|1|a|G|1099
6HTQ|1|a|U|1100
6HTQ|1|a|U|1101
6HTQ|1|a|A|1102
6HTQ|1|a|A|1103
6HTQ|1|a|G|1104
6HTQ|1|a|U|1105
6HTQ|1|a|C|1106

Current chains

Chain a

16S rRNA

Nearby chains

Chain b

30S ribosomal protein S2

Chain g

30S ribosomal protein S7