HL_6HTQ_105
3D structure
- PDB id
- 6HTQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Stringent response control by a bifunctional RelA enzyme in the presence and absence of the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.5 Å
Loop
- Sequence
- GGUUCGAUUCC
- Length
- 11 nucleotides
- Bulged bases
- 6HTQ|1|u|U|55, 6HTQ|1|u|C|56, 6HTQ|1|u|G|57
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6HTQ_105 not in the Motif Atlas
- Homologous match to HL_4V7M_040
- Geometric discrepancy: 0.5313
- The information below is about HL_4V7M_040
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50951.1
- Basepair signature
- cWW-F-F-tWH-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
6HTQ|1|u|G|52
6HTQ|1|u|G|53
6HTQ|1|u|U|54
6HTQ|1|u|U|55
6HTQ|1|u|C|56
6HTQ|1|u|G|57
6HTQ|1|u|A|58
6HTQ|1|u|U|59
6HTQ|1|u|U|60
6HTQ|1|u|C|61
6HTQ|1|u|C|62
Current chains
- Chain u
- A/R-tRNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain x
- GTP pyrophosphokinase
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