HL_6N1D_050
3D structure
- PDB id
- 6N1D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- X-ray Crystal complex showing Spontaneous Ribosomal Translocation of mRNA and tRNAs into a Chimeric Hybrid State
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- UAUUGAAGCA
- Length
- 10 nucleotides
- Bulged bases
- 6N1D|1|A23S|C|574
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6N1D_050 not in the Motif Atlas
- Geometric match to HL_7RQB_018
- Geometric discrepancy: 0.3876
- The information below is about HL_7RQB_018
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_41998.1
- Basepair signature
- cWW-tWH-F-F-F
- Number of instances in this motif group
- 69
Unit IDs
6N1D|1|A23S|U|566
6N1D|1|A23S|A|567
6N1D|1|A23S|U|568
6N1D|1|A23S|U|569
6N1D|1|A23S|G|570
6N1D|1|A23S|A|571
6N1D|1|A23S|A|572
6N1D|1|A23S|G|573
6N1D|1|A23S|C|574
6N1D|1|A23S|A|575
Current chains
- Chain A23S
- 23S rRNA
Nearby chains
- Chain AL03
- 50S ribosomal protein L3
- Chain AL15
- 50S ribosomal protein L15
- Chain AL21
- 50S ribosomal protein L21
- Chain AL32
- 50S ribosomal protein L32
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