HL_6N1D_122
3D structure
- PDB id
- 6N1D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- X-ray Crystal complex showing Spontaneous Ribosomal Translocation of mRNA and tRNAs into a Chimeric Hybrid State
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- CGGUGAAAUG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6N1D_122 not in the Motif Atlas
- Homologous match to HL_4LFB_015
- Geometric discrepancy: 0.1439
- The information below is about HL_4LFB_015
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_38491.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
6N1D|1|B16S|C|689
6N1D|1|B16S|G|690
6N1D|1|B16S|G|691
6N1D|1|B16S|U|692
6N1D|1|B16S|G|693
6N1D|1|B16S|A|694
6N1D|1|B16S|A|695
6N1D|1|B16S|A|696
6N1D|1|B16S|U|697
6N1D|1|B16S|G|698
Current chains
- Chain B16S
- 16S rRNA
Nearby chains
- Chain B23S
- Large subunit ribosomal RNA; LSU rRNA
- Chain BMRN
- mRNA
- Chain BPTN
- Transfer RNA; tRNA
- Chain BS11
- 30S ribosomal protein S11
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