HL_6N1D_162
3D structure
- PDB id
- 6N1D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- X-ray Crystal complex showing Spontaneous Ribosomal Translocation of mRNA and tRNAs into a Chimeric Hybrid State
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- GGAUGCAAAC
- Length
- 10 nucleotides
- Bulged bases
- 6N1D|1|B23S|U|747, 6N1D|1|B23S|A|751, 6N1D|1|B23S|A|752
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6N1D_162 not in the Motif Atlas
- Homologous match to HL_7RQB_023
- Geometric discrepancy: 0.1546
- The information below is about HL_7RQB_023
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_39334.6
- Basepair signature
- cWW-cWS-tSW-F-F
- Number of instances in this motif group
- 6
Unit IDs
6N1D|1|B23S|G|744
6N1D|1|B23S|G|745
6N1D|1|B23S|A|746
6N1D|1|B23S|U|747
6N1D|1|B23S|G|748
6N1D|1|B23S|C|749
6N1D|1|B23S|A|750
6N1D|1|B23S|A|751
6N1D|1|B23S|A|752
6N1D|1|B23S|C|753
Current chains
- Chain B23S
- 23S rRNA
Nearby chains
- Chain BL03
- 50S ribosomal protein L3
- Chain BL22
- 50S ribosomal protein L22
- Chain BL32
- 50S ribosomal protein L32
- Chain BL34
- 50S ribosomal protein L34
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