3D structure

PDB id
6NUO (explore in PDB, NAKB, or RNA 3D Hub)
Description
Modified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)
Experimental method
X-RAY DIFFRACTION
Resolution
3.2 Å

Loop

Sequence
GGUAAUGGC
Length
9 nucleotides
Bulged bases
6NUO|1|QA|G|266
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6NUO_006 not in the Motif Atlas
Homologous match to HL_4LFB_006
Geometric discrepancy: 0.1057
The information below is about HL_4LFB_006
Detailed Annotation
GNRA related
Broad Annotation
GNRA related
Motif group
HL_84299.4
Basepair signature
cWW-F-F-F-F-F-F
Number of instances in this motif group
9

Unit IDs

6NUO|1|QA|G|259
6NUO|1|QA|G|260
6NUO|1|QA|U|261
6NUO|1|QA|A|262
6NUO|1|QA|A|263
6NUO|1|QA|U|264
6NUO|1|QA|G|265
6NUO|1|QA|G|266
6NUO|1|QA|C|267

Current chains

Chain QA
16S rRNA

Nearby chains

Chain QQ
30S ribosomal protein S17
Chain QT
30S ribosomal protein S20

Coloring options:


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