3D structure

PDB id
6NUO (explore in PDB, NAKB, or RNA 3D Hub)
Description
Modified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)
Experimental method
X-RAY DIFFRACTION
Resolution
3.2 Å

Loop

Sequence
GAUUAGAUACC
Length
11 nucleotides
Bulged bases
6NUO|1|XA|U|793
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6NUO_123 not in the Motif Atlas
Homologous match to HL_5J7L_017
Geometric discrepancy: 0.1453
The information below is about HL_5J7L_017
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_75293.5
Basepair signature
cWW-F-F-F-F-F-F-F-F
Number of instances in this motif group
11

Unit IDs

6NUO|1|XA|G|786
6NUO|1|XA|A|787
6NUO|1|XA|U|788
6NUO|1|XA|U|789
6NUO|1|XA|A|790
6NUO|1|XA|G|791
6NUO|1|XA|A|792
6NUO|1|XA|U|793
6NUO|1|XA|A|794
6NUO|1|XA|C|795
6NUO|1|XA|C|796

Current chains

Chain XA
16S rRNA

Nearby chains

Chain XK
30S ribosomal protein S11
Chain XV
Transfer RNA; tRNA
Chain XX
mRNA
Chain YA
Large subunit ribosomal RNA; LSU rRNA

Coloring options:


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