HL_6NUO_165

3D structure

PDB id

6NUO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

GGAUGCAAAC

Length

10 nucleotides

Bulged bases

6NUO|1|YA|U|794, 6NUO|1|YA|A|798

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6NUO_165 not in the Motif Atlas

Homologous match to HL_7RQB_023

Geometric discrepancy: 0.0742

The information below is about HL_7RQB_023

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_39334.6

Basepair signature

cWW-cWS-tSW-F-F

Number of instances in this motif group

6

Unit IDs

6NUO|1|YA|G|791
6NUO|1|YA|G|792
6NUO|1|YA|A|793
6NUO|1|YA|U|794
6NUO|1|YA|G|795
6NUO|1|YA|C|796
6NUO|1|YA|A|797
6NUO|1|YA|A|798
6NUO|1|YA|A|799
6NUO|1|YA|C|800

Current chains

Chain YA

23S rRNA

Nearby chains

Chain Y5

50S ribosomal protein L32

Chain Y7

50S ribosomal protein L34

Chain YE

50S ribosomal protein L3

Chain YW

50S ribosomal protein L22