HL_6NUO_172

3D structure

PDB id

6NUO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

CGUAAUAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6NUO_172 not in the Motif Atlas

Homologous match to HL_6PRV_002

Geometric discrepancy: 0.5001

The information below is about HL_6PRV_002

Detailed Annotation

GNRA wlth tandem sheared

Broad Annotation

No text annotation

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

6NUO|1|YA|C|1138
6NUO|1|YA|G|1139
6NUO|1|YA|U|1140
6NUO|1|YA|A|1141
6NUO|1|YA|A|1142
6NUO|1|YA|U|1143
6NUO|1|YA|A|1144
6NUO|1|YA|G|1145

Current chains

Chain YA

23S rRNA

Nearby chains

Chain YH

50S ribosomal protein L6