HL_6O90_086

3D structure

PDB id

6O90 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class05

Experimental method

ELECTRON MICROSCOPY

Resolution

3.49 Å

Loop

Sequence

CGGUGAAAUG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6O90_086 not in the Motif Atlas

Homologous match to HL_4LFB_015

Geometric discrepancy: 0.1496

The information below is about HL_4LFB_015

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_38491.2

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

12

Unit IDs

6O90|1|a|C|704
6O90|1|a|G|705
6O90|1|a|G|706
6O90|1|a|U|707
6O90|1|a|G|708
6O90|1|a|A|709
6O90|1|a|A|710
6O90|1|a|A|711
6O90|1|a|U|712
6O90|1|a|G|713

Current chains

Chain a

16S rRNA

Nearby chains

Chain k

30S ribosomal protein S11