HL_6OLE_064
3D structure
- PDB id
- 6OLE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AP and PE tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- ACGUGCAAAU
- Length
- 10 nucleotides
- Bulged bases
- 6OLE|1|t|U|1578, 6OLE|1|t|A|1582
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6OLE_064 not in the Motif Atlas
- Homologous match to HL_5TBW_020
- Geometric discrepancy: 0.0802
- The information below is about HL_5TBW_020
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_39334.8
- Basepair signature
- cWW-cWS-tSW-F-F
- Number of instances in this motif group
- 7
Unit IDs
6OLE|1|t|A|1575
6OLE|1|t|C|1576
6OLE|1|t|G|1577
6OLE|1|t|U|1578
6OLE|1|t|G|1579
6OLE|1|t|C|1580
6OLE|1|t|A|1581
6OLE|1|t|A|1582
6OLE|1|t|A|1583
6OLE|1|t|U|1584
Current chains
- Chain t
- 28S ribosomal RNA
Nearby chains
- Chain B
- 60S ribosomal protein L3
- Chain Q
- 60S ribosomal protein L17
- Chain k
- 60S ribosomal protein L37
- Chain y
- Cadherin-1
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