HL_6OLE_100
3D structure
- PDB id
- 6OLE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AP and PE tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UCAAACGGUAACG
- Length
- 13 nucleotides
- Bulged bases
- 6OLE|1|t|A|4176, 6OLE|1|t|C|4183
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6OLE_100 not in the Motif Atlas
- Homologous match to HL_8C3A_056
- Geometric discrepancy: 0.1277
- The information below is about HL_8C3A_056
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_19870.9
- Basepair signature
- cWW-tHH-cWW-tHS-F-F-tWW
- Number of instances in this motif group
- 8
Unit IDs
6OLE|1|t|U|4172
6OLE|1|t|C|4173
6OLE|1|t|A|4174
6OLE|1|t|A|4175
6OLE|1|t|A|4176
6OLE|1|t|C|4177
6OLE|1|t|G|4178
6OLE|1|t|G|4179
6OLE|1|t|U|4180
6OLE|1|t|A|4181
6OLE|1|t|A|4182
6OLE|1|t|C|4183
6OLE|1|t|G|4184
Current chains
- Chain t
- 28S ribosomal RNA
Nearby chains
- Chain K
- 60S ribosomal protein L10
- Chain U
- 60S ribosomal protein L21
- Chain c
- 60S ribosomal protein L29
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