3D structure

PDB id
6OST (explore in PDB, NAKB, or RNA 3D Hub)
Description
RF2 pre-accommodated state bound Release complex 70S at 24ms
Experimental method
ELECTRON MICROSCOPY
Resolution
4.2 Å

Loop

Sequence
GGUAAGUUC
Length
9 nucleotides
Bulged bases
6OST|1|1|U|1955
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6OST_048 not in the Motif Atlas
Homologous match to HL_7A0S_048
Geometric discrepancy: 0.1342
The information below is about HL_7A0S_048
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_61418.2
Basepair signature
cWW-F-F-F-F-F-F
Number of instances in this motif group
12

Unit IDs

6OST|1|1|G|1949
6OST|1|1|G|1950
6OST|1|1|U|1951
6OST|1|1|A|1952
6OST|1|1|A|1953
6OST|1|1|G|1954
6OST|1|1|U|1955
6OST|1|1|U|1956
6OST|1|1|C|1957

Current chains

Chain 1
23S Ribosomal RNA

Nearby chains

Chain 2
Small subunit ribosomal RNA; SSU rRNA
Chain K
50S ribosomal protein L14

Coloring options:


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