HL_6QNR_076

3D structure

PDB id

6QNR (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome elongation complex (EC) with experimentally assigned potassium ions

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

UUUACCAAAAA

Length

11 nucleotides

Bulged bases

6QNR|1|14|A|1780, 6QNR|1|14|C|1781, 6QNR|1|14|C|1782, 6QNR|1|14|A|1786

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6QNR_076 not in the Motif Atlas

Homologous match to HL_7RQB_045

Geometric discrepancy: 0.0774

The information below is about HL_7RQB_045

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_43613.5

Basepair signature

cWW-tWH-tWH-F

Number of instances in this motif group

6

Unit IDs

6QNR|1|14|U|1777
6QNR|1|14|U|1778
6QNR|1|14|U|1779
6QNR|1|14|A|1780
6QNR|1|14|C|1781
6QNR|1|14|C|1782
6QNR|1|14|A|1783
6QNR|1|14|A|1784
6QNR|1|14|A|1785
6QNR|1|14|A|1786
6QNR|1|14|A|1787

Current chains

Chain 14

23S ribosomal RNA

Nearby chains

Chain 19

50S ribosomal protein L2

Chain L5

50S ribosomal protein L34