HL_6QNR_201

3D structure

PDB id

6QNR (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome elongation complex (EC) with experimentally assigned potassium ions

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CUGAAAGCAUCUAAG

Length

15 nucleotides

Bulged bases

6QNR|1|1H|G|2765, 6QNR|1|1H|C|2769

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6QNR_201 not in the Motif Atlas

Homologous match to HL_7RQB_066

Geometric discrepancy: 0.0696

The information below is about HL_7RQB_066

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_56677.7

Basepair signature

cWW-tWH-tSH-cWH-tSH-tHW-tHW-tSW

Number of instances in this motif group

8

Unit IDs

6QNR|1|1H|C|2759
6QNR|1|1H|U|2760
6QNR|1|1H|G|2761
6QNR|1|1H|A|2762
6QNR|1|1H|A|2763
6QNR|1|1H|A|2764
6QNR|1|1H|G|2765
6QNR|1|1H|C|2766
6QNR|1|1H|A|2767
6QNR|1|1H|U|2768
6QNR|1|1H|C|2769
6QNR|1|1H|U|2770
6QNR|1|1H|A|2771
6QNR|1|1H|A|2772
6QNR|1|1H|G|2773

Current chains

Chain 1H

23S ribosomal RNA

Nearby chains

Chain 51

50S ribosomal protein L6

Chain 58

50S ribosomal protein L13