HL_6QNR_255
3D structure
- PDB id
- 6QNR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome elongation complex (EC) with experimentally assigned potassium ions
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GGA(PSU)UGAA(MIA)A(PSU)CC
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: PSU, MIA
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6QNR_255 not in the Motif Atlas
- Homologous match to HL_6GSL_221
- Geometric discrepancy: 0.3325
- The information below is about HL_6GSL_221
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_06285.3
- Basepair signature
- cWW-cWW-F-F-tSH-F-F-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
6QNR|1|3K|G|29
6QNR|1|3K|G|30
6QNR|1|3K|A|31
6QNR|1|3K|PSU|32
6QNR|1|3K|U|33
6QNR|1|3K|G|34
6QNR|1|3K|A|35
6QNR|1|3K|A|36
6QNR|1|3K|MIA|37
6QNR|1|3K|A|38
6QNR|1|3K|PSU|39
6QNR|1|3K|C|40
6QNR|1|3K|C|41
Current chains
- Chain 3K
- E. coli tRNAPhe
Nearby chains
- Chain 13
- Small subunit ribosomal RNA; SSU rRNA
- Chain 2I
- 30S ribosomal protein S11
- Chain 2K
- Transfer RNA; tRNA
- Chain 4K
- mRNA
- Chain 6E
- 30S ribosomal protein S7
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