HL_6T59_053
3D structure
- PDB id
- 6T59 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of rabbit 80S ribosome translating beta-tubulin in complex with tetratricopeptide protein 5 and nascent chain-associated complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.11 Å
Loop
- Sequence
- UUUAAUUAAAA
- Length
- 11 nucleotides
- Bulged bases
- 6T59|1|54|A|3642, 6T59|1|54|A|3643, 6T59|1|54|U|3644, 6T59|1|54|A|3648
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6T59_053 not in the Motif Atlas
- Homologous match to HL_5TBW_046
- Geometric discrepancy: 0.1812
- The information below is about HL_5TBW_046
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_43613.6
- Basepair signature
- cWW-tWH-tWH-F
- Number of instances in this motif group
- 6
Unit IDs
6T59|1|54|U|3639
6T59|1|54|U|3640
6T59|1|54|U|3641
6T59|1|54|A|3642
6T59|1|54|A|3643
6T59|1|54|U|3644
6T59|1|54|U|3645
6T59|1|54|A|3646
6T59|1|54|A|3647
6T59|1|54|A|3648
6T59|1|54|A|3649
Current chains
- Chain 54
- 28S ribosomal RNA
Nearby chains
- Chain 1
- Tubulin Beta
- Chain A3
- Ribosomal protein L8
- Chain j3
- Ribosomal protein L37
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