HL_6W6L_055
3D structure
- PDB id
- 6W6L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the human ribosome-TMCO1 translocon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.84 Å
Loop
- Sequence
- UUUAAUUAAAA
- Length
- 11 nucleotides
- Bulged bases
- 6W6L|1|t|A|3613, 6W6L|1|t|A|3614, 6W6L|1|t|U|3615, 6W6L|1|t|A|3619
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6W6L_055 not in the Motif Atlas
- Homologous match to HL_5TBW_046
- Geometric discrepancy: 0.197
- The information below is about HL_5TBW_046
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_43613.6
- Basepair signature
- cWW-tWH-tWH-F
- Number of instances in this motif group
- 6
Unit IDs
6W6L|1|t|U|3610
6W6L|1|t|U|3611
6W6L|1|t|U|3612
6W6L|1|t|A|3613
6W6L|1|t|A|3614
6W6L|1|t|U|3615
6W6L|1|t|U|3616
6W6L|1|t|A|3617
6W6L|1|t|A|3618
6W6L|1|t|A|3619
6W6L|1|t|A|3620
Current chains
- Chain t
- 28S ribosomal RNA
Nearby chains
- Chain A
- 60S ribosomal protein L8
- Chain k
- 60S ribosomal protein L37
- Chain y
- Nascent chain mixture
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