HL_6XA1_024
3D structure
- PDB id
- 6XA1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a drug-like compound stalled human translation termination complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- ACGUGCAAAU
- Length
- 10 nucleotides
- Bulged bases
- 6XA1|1|L5|U|1583, 6XA1|1|L5|A|1587
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6XA1_024 not in the Motif Atlas
- Homologous match to HL_5TBW_020
- Geometric discrepancy: 0.1047
- The information below is about HL_5TBW_020
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_39334.8
- Basepair signature
- cWW-cWS-tSW-F-F
- Number of instances in this motif group
- 7
Unit IDs
6XA1|1|L5|A|1580
6XA1|1|L5|C|1581
6XA1|1|L5|G|1582
6XA1|1|L5|U|1583
6XA1|1|L5|G|1584
6XA1|1|L5|C|1585
6XA1|1|L5|A|1586
6XA1|1|L5|A|1587
6XA1|1|L5|A|1588
6XA1|1|L5|U|1589
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LB
- 60S ribosomal protein L3
- Chain LP
- 60S ribosomal protein L17
- Chain Lj
- 60S ribosomal protein L37
- Chain NC
- Stalled Nascent chain
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