HL_6XE0_017
3D structure
- PDB id
- 6XE0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of NusG-CTD bound to 70S ribosome (30S: NusG-CTD fragment)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.8 Å
Loop
- Sequence
- GAUUAGAUACC
- Length
- 11 nucleotides
- Bulged bases
- 6XE0|1|W|U|793
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6XE0_017 not in the Motif Atlas
- Homologous match to HL_5J7L_017
- Geometric discrepancy: 0.1823
- The information below is about HL_5J7L_017
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.5
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
6XE0|1|W|G|786
6XE0|1|W|A|787
6XE0|1|W|U|788
6XE0|1|W|U|789
6XE0|1|W|A|790
6XE0|1|W|G|791
6XE0|1|W|A|792
6XE0|1|W|U|793
6XE0|1|W|A|794
6XE0|1|W|C|795
6XE0|1|W|C|796
Current chains
- Chain W
- 16s rRNA
Nearby chains
- Chain J
- 30S ribosomal protein S11
- Chain U
- 30S ribosomal protein S21
Coloring options: