HL_6XZA_017
3D structure
- PDB id
- 6XZA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome in complex with dirithromycin, and deacylated tRNA(iMet) (focused classification).
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.66 Å
Loop
- Sequence
- GAUUAGAUACC
- Length
- 11 nucleotides
- Bulged bases
- 6XZA|1|A1|U|793
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6XZA_017 not in the Motif Atlas
- Homologous match to HL_5J7L_017
- Geometric discrepancy: 0.0725
- The information below is about HL_5J7L_017
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.5
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
6XZA|1|A1|G|786
6XZA|1|A1|A|787
6XZA|1|A1|U|788
6XZA|1|A1|U|789
6XZA|1|A1|A|790
6XZA|1|A1|G|791
6XZA|1|A1|A|792
6XZA|1|A1|U|793
6XZA|1|A1|A|794
6XZA|1|A1|C|795
6XZA|1|A1|C|796
Current chains
- Chain A1
- 16S rRNA
Nearby chains
- Chain A2
- Large subunit ribosomal RNA; LSU rRNA
- Chain K1
- 30S ribosomal protein S11
- Chain U1
- 30S ribosomal protein S21
- Chain f2
- Transfer RNA; tRNA
Coloring options: