HL_6ZCE_025
3D structure
- PDB id
- 6ZCE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a yeast ABCE1-bound 43S pre-initiation complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.3 Å
Loop
- Sequence
- GACUCAACAC
- Length
- 10 nucleotides
- Bulged bases
- 6ZCE|1|A|A|1196
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6ZCE_025 not in the Motif Atlas
- Homologous match to HL_4V88_212
- Geometric discrepancy: 0.1778
- The information below is about HL_4V88_212
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50779.1
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
6ZCE|1|A|G|1188
6ZCE|1|A|A|1189
6ZCE|1|A|C|1190
6ZCE|1|A|U|1191
6ZCE|1|A|C|1192
6ZCE|1|A|A|1193
6ZCE|1|A|A|1194
6ZCE|1|A|C|1195
6ZCE|1|A|A|1196
6ZCE|1|A|C|1197
Current chains
- Chain A
- 18S ribosomal RNA (1719-MER)
Nearby chains
- Chain R
- 40S ribosomal protein S16-A
- Chain V
- 40S ribosomal protein S20
Coloring options: