HL_6ZM5_057
3D structure
- PDB id
- 6ZM5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial ribosome in complex with OXA1L, mRNA, A/A tRNA, P/P tRNA and nascent polypeptide
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.89 Å
Loop
- Sequence
- GAGUAGAGUGC
- Length
- 11 nucleotides
- Bulged bases
- 6ZM5|1|AA|U|1443, 6ZM5|1|AA|U|1448
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6ZM5_057 not in the Motif Atlas
- Geometric match to HL_5J7L_029
- Geometric discrepancy: 0.3544
- The information below is about HL_5J7L_029
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_06226.4
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
6ZM5|1|AA|G|1440
6ZM5|1|AA|A|1441
6ZM5|1|AA|G|1442
6ZM5|1|AA|U|1443
6ZM5|1|AA|A|1444
6ZM5|1|AA|G|1445
6ZM5|1|AA|A|1446
6ZM5|1|AA|G|1447
6ZM5|1|AA|U|1448
6ZM5|1|AA|G|1449
6ZM5|1|AA|C|1450
Current chains
- Chain AA
- 12S mitochondrial rRNA
Nearby chains
- Chain AG
- 28S ribosomal protein S9, mitochondrial
- Chain AH
- 28S ribosomal protein S10, mitochondrial
- Chain AK
- 28S ribosomal protein S14, mitochondrial
- Chain AZ
- 28S ribosomal protein S33, mitochondrial
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