HL_6ZM5_063
3D structure
- PDB id
- 6ZM5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial ribosome in complex with OXA1L, mRNA, A/A tRNA, P/P tRNA and nascent polypeptide
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.89 Å
Loop
- Sequence
- UUAAACAAA
- Length
- 9 nucleotides
- Bulged bases
- 6ZM5|1|w|A|16, 6ZM5|1|w|C|20
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6ZM5_063 not in the Motif Atlas
- Homologous match to HL_8JOZ_001
- Geometric discrepancy: 0.3208
- The information below is about HL_8JOZ_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_55043.2
- Basepair signature
- cWW-tSH-cWS-F
- Number of instances in this motif group
- 5
Unit IDs
6ZM5|1|w|U|12
6ZM5|1|w|U|13
6ZM5|1|w|A|14
6ZM5|1|w|A|15
6ZM5|1|w|A|16
6ZM5|1|w|C|20
6ZM5|1|w|A|21
6ZM5|1|w|A|22
6ZM5|1|w|A|23
Current chains
- Chain w
- A-site tRNA with aminoacylation
Nearby chains
- Chain 8
- 39S ribosomal protein L40, mitochondrial
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: