HL_6ZU5_022

3D structure

PDB id

6ZU5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Paranosema locustae ribosome in complex with Lso2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

ACGUGCAAUU

Length

10 nucleotides

Bulged bases

6ZU5|1|L50|U|633, 6ZU5|1|L50|A|637

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZU5_022 not in the Motif Atlas

Homologous match to HL_5TBW_020

Geometric discrepancy: 0.08

The information below is about HL_5TBW_020

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_39334.8

Basepair signature

cWW-cWS-tSW-F-F

Number of instances in this motif group

7

Unit IDs

6ZU5|1|L50|A|630
6ZU5|1|L50|C|631
6ZU5|1|L50|G|632
6ZU5|1|L50|U|633
6ZU5|1|L50|G|634
6ZU5|1|L50|C|635
6ZU5|1|L50|A|636
6ZU5|1|L50|A|637
6ZU5|1|L50|U|638
6ZU5|1|L50|U|639

Current chains

Chain L50

25S rRNA

Nearby chains

Chain LB0

uL3

Chain LJJ

eL37

Chain LP0

uL22