HL_6ZU5_023

3D structure

PDB id

6ZU5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Paranosema locustae ribosome in complex with Lso2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GCGAAAGAC

Length

9 nucleotides

Bulged bases

6ZU5|1|L50|A|667

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZU5_023 not in the Motif Atlas

Homologous match to HL_8C3A_021

Geometric discrepancy: 0.1401

The information below is about HL_8C3A_021

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_56443.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

6ZU5|1|L50|G|664
6ZU5|1|L50|C|665
6ZU5|1|L50|G|666
6ZU5|1|L50|A|667
6ZU5|1|L50|A|668
6ZU5|1|L50|A|669
6ZU5|1|L50|G|670
6ZU5|1|L50|A|671
6ZU5|1|L50|C|672

Current chains

Chain L50

25S rRNA

Nearby chains

Chain LA0

uL2

Chain LJJ

eL37

Chain LN0

eL15