HL_6ZU5_059

3D structure

PDB id

6ZU5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Paranosema locustae ribosome in complex with Lso2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GGCAGCGC

Length

8 nucleotides

Bulged bases

6ZU5|1|L50|G|2289

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6ZU5_059 not in the Motif Atlas

Homologous match to HL_8C3A_063

Geometric discrepancy: 0.1526

The information below is about HL_8C3A_063

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_79150.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

12

Unit IDs

6ZU5|1|L50|G|2288
6ZU5|1|L50|G|2289
6ZU5|1|L50|C|2290
6ZU5|1|L50|A|2291
6ZU5|1|L50|G|2292
6ZU5|1|L50|C|2293
6ZU5|1|L50|G|2294
6ZU5|1|L50|C|2295

Current chains

Chain L50

25S rRNA

Nearby chains

Chain LH0

uL6

Chain LMM

eL40