HL_7ACJ_012

3D structure

PDB id

7ACJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of translocated trans-translation complex on E. coli stalled ribosome.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

ACACGUGGUAU

Length

11 nucleotides

Bulged bases

7ACJ|1|1|G|386, 7ACJ|1|1|G|389

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ACJ_012 not in the Motif Atlas

Homologous match to HL_5J7L_145

Geometric discrepancy: 0.192

The information below is about HL_5J7L_145

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91503.7

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

7ACJ|1|1|A|382
7ACJ|1|1|C|383
7ACJ|1|1|A|384
7ACJ|1|1|C|385
7ACJ|1|1|G|386
7ACJ|1|1|U|387
7ACJ|1|1|G|388
7ACJ|1|1|G|389
7ACJ|1|1|U|390
7ACJ|1|1|A|391
7ACJ|1|1|U|392

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain X

50S ribosomal protein L28