HL_7ASN_067

3D structure

PDB id

7ASN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 50S after 30 minutes incubation a 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.73 Å

Loop

Sequence

GCACGUGAAAU

Length

11 nucleotides

Bulged bases

7ASN|1|A|G|432, 7ASN|1|A|U|433

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ASN_067 not in the Motif Atlas

Homologous match to HL_5J7L_145

Geometric discrepancy: 0.4719

The information below is about HL_5J7L_145

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91503.7

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

7ASN|1|A|G|428
7ASN|1|A|C|429
7ASN|1|A|A|430
7ASN|1|A|C|431
7ASN|1|A|G|432
7ASN|1|A|U|433
7ASN|1|A|G|434
7ASN|1|A|A|435
7ASN|1|A|A|436
7ASN|1|A|A|437
7ASN|1|A|U|438

Current chains

Chain A

23S

Nearby chains

Chain V

50S ribosomal protein L28