HL_7AZO_015
3D structure
- PDB id
- 7AZO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- CGGUGAAAUG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7AZO_015 not in the Motif Atlas
- Homologous match to HL_4LFB_015
- Geometric discrepancy: 0.1394
- The information below is about HL_4LFB_015
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.5
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
7AZO|1|16SA|C|1318
7AZO|1|16SA|G|1319
7AZO|1|16SA|G|1320
7AZO|1|16SA|U|1321
7AZO|1|16SA|G|1322
7AZO|1|16SA|A|1323
7AZO|1|16SA|A|1324
7AZO|1|16SA|A|1325
7AZO|1|16SA|U|1326
7AZO|1|16SA|G|1327
Current chains
- Chain 16SA
- 16S rRNA
Nearby chains
- Chain 23SA
- Large subunit ribosomal RNA; LSU rRNA
- Chain ESIA
- Transfer RNA; tRNA
- Chain MRNA
- RNA (30-MER)
- Chain S11A
- 30S ribosomal protein S11
- Chain S7A
- 30S ribosomal protein S7
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