HL_7AZO_111
3D structure
- PDB id
- 7AZO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- UUUACCAAAAA
- Length
- 11 nucleotides
- Bulged bases
- 7AZO|1|23SA|A|1814, 7AZO|1|23SA|C|1815, 7AZO|1|23SA|C|1816, 7AZO|1|23SA|A|1820
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7AZO_111 not in the Motif Atlas
- Geometric match to HL_7RQB_045
- Geometric discrepancy: 0.0664
- The information below is about HL_7RQB_045
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_43613.5
- Basepair signature
- cWW-tWH-tWH-F
- Number of instances in this motif group
- 6
Unit IDs
7AZO|1|23SA|U|1811
7AZO|1|23SA|U|1812
7AZO|1|23SA|U|1813
7AZO|1|23SA|A|1814
7AZO|1|23SA|C|1815
7AZO|1|23SA|C|1816
7AZO|1|23SA|A|1817
7AZO|1|23SA|A|1818
7AZO|1|23SA|A|1819
7AZO|1|23SA|A|1820
7AZO|1|23SA|A|1821
Current chains
- Chain 23SA
- 23S rRNA
Nearby chains
- Chain L2A
- 50S ribosomal protein L2
- Chain L34A
- 50S ribosomal protein L34
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