HL_7AZO_132

3D structure

PDB id

7AZO (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CUGAAAGCAUCUAAG

Length

15 nucleotides

Bulged bases

7AZO|1|23SA|G|2767, 7AZO|1|23SA|C|2771

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7AZO_132 not in the Motif Atlas

Geometric match to HL_7RQB_066

Geometric discrepancy: 0.0784

The information below is about HL_7RQB_066

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_56677.7

Basepair signature

cWW-tWH-tSH-cWH-tSH-tHW-tHW-tSW

Number of instances in this motif group

8

Unit IDs

7AZO|1|23SA|C|2761
7AZO|1|23SA|U|2762
7AZO|1|23SA|G|2763
7AZO|1|23SA|A|2764
7AZO|1|23SA|A|2765
7AZO|1|23SA|A|2766
7AZO|1|23SA|G|2767
7AZO|1|23SA|C|2768
7AZO|1|23SA|A|2769
7AZO|1|23SA|U|2770
7AZO|1|23SA|C|2771
7AZO|1|23SA|U|2772
7AZO|1|23SA|A|2773
7AZO|1|23SA|A|2774
7AZO|1|23SA|G|2775

Current chains

Chain 23SA

23S rRNA

Nearby chains

Chain L13A

50S ribosomal protein L13

Chain L6A

50S ribosomal protein L6