HL_7AZO_158
3D structure
- PDB id
- 7AZO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- GGAUGCAAAC
- Length
- 10 nucleotides
- Bulged bases
- 7AZO|1|23SB|U|796, 7AZO|1|23SB|A|800, 7AZO|1|23SB|A|801
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7AZO_158 not in the Motif Atlas
- Geometric match to HL_7RQB_023
- Geometric discrepancy: 0.0836
- The information below is about HL_7RQB_023
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_39334.6
- Basepair signature
- cWW-cWS-tSW-F-F
- Number of instances in this motif group
- 6
Unit IDs
7AZO|1|23SB|G|793
7AZO|1|23SB|G|794
7AZO|1|23SB|A|795
7AZO|1|23SB|U|796
7AZO|1|23SB|G|797
7AZO|1|23SB|C|798
7AZO|1|23SB|A|799
7AZO|1|23SB|A|800
7AZO|1|23SB|A|801
7AZO|1|23SB|C|802
Current chains
- Chain 23SB
- 23S rRNA
Nearby chains
- Chain L22B
- 50S ribosomal protein L22
- Chain L32B
- 50S ribosomal protein L32
- Chain L34B
- 50S ribosomal protein L34
- Chain L3B
- 50S ribosomal protein L3
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