HL_7AZO_215
3D structure
- PDB id
- 7AZO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- GAUUGAA(MIA)AUC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: MIA
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7AZO_215 not in the Motif Atlas
- Geometric match to HL_6GSK_218
- Geometric discrepancy: 0.335
- The information below is about HL_6GSK_218
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_14063.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
7AZO|1|ESIA|G|30
7AZO|1|ESIA|A|31
7AZO|1|ESIA|U|32
7AZO|1|ESIA|U|33
7AZO|1|ESIA|G|34
7AZO|1|ESIA|A|35
7AZO|1|ESIA|A|36
7AZO|1|ESIA|MIA|37
7AZO|1|ESIA|A|38
7AZO|1|ESIA|U|39
7AZO|1|ESIA|C|40
Current chains
- Chain ESIA
- Phe-tRNA
Nearby chains
- Chain 16SA
- Small subunit ribosomal RNA; SSU rRNA
- Chain MRNA
- RNA (30-MER)
- Chain PSIA
- Transfer RNA; tRNA
- Chain S11A
- 30S ribosomal protein S11
- Chain S7A
- 30S ribosomal protein S7
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