HL_7BL6_049

3D structure

PDB id

7BL6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S-ObgE-GMPPNP particle

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

GGUAAGUUC

Length

9 nucleotides

Bulged bases

7BL6|1|A|U|1955

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7BL6_049 not in the Motif Atlas

Homologous match to HL_7A0S_048

Geometric discrepancy: 0.1417

The information below is about HL_7A0S_048

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_61418.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

12

Unit IDs

7BL6|1|A|G|1949
7BL6|1|A|G|1950
7BL6|1|A|U|1951
7BL6|1|A|A|1952
7BL6|1|A|A|1953
7BL6|1|A|G|1954
7BL6|1|A|U|1955
7BL6|1|A|U|1956
7BL6|1|A|C|1957

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 9

GTPase ObgE/CgtA

Chain K

50S ribosomal protein L14