3D structure

PDB id
7BL6 (explore in PDB, NAKB, or RNA 3D Hub)
Description
50S-ObgE-GMPPNP particle
Experimental method
ELECTRON MICROSCOPY
Resolution
4 Å

Loop

Sequence
AGUUCAUAU
Length
9 nucleotides
Bulged bases
7BL6|1|A|U|2473, 7BL6|1|A|U|2474
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7BL6_076 not in the Motif Atlas
Homologous match to HL_7A0S_059
Geometric discrepancy: 0.2539
The information below is about HL_7A0S_059
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_52011.1
Basepair signature
cWW-tSH-F-F-F-F-F
Number of instances in this motif group
9

Unit IDs

7BL6|1|A|A|2471
7BL6|1|A|G|2472
7BL6|1|A|U|2473
7BL6|1|A|U|2474
7BL6|1|A|C|2475
7BL6|1|A|A|2476
7BL6|1|A|U|2477
7BL6|1|A|A|2478
7BL6|1|A|U|2479

Current chains

Chain A
23S ribosomal RNA

Nearby chains

Chain 9
GTPase ObgE/CgtA
Chain G
50S ribosomal protein L6
Chain M
50S ribosomal protein L16
Chain g
50S ribosomal protein L36

Coloring options:


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