HL_7JSW_047
3D structure
- PDB id
- 7JSW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- ArfB Rescue of a 70S Ribosome stalled on truncated mRNA with a partial A-site codon (+2-III)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GUAACUAUAAC
- Length
- 11 nucleotides
- Bulged bases
- 7JSW|1|1|A|1913
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7JSW_047 not in the Motif Atlas
- Homologous match to HL_9DFE_046
- Geometric discrepancy: 0.4454
- The information below is about HL_9DFE_046
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_25847.2
- Basepair signature
- cWW-F-cSH-tHW-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
7JSW|1|1|G|1910
7JSW|1|1|U|1911
7JSW|1|1|A|1912
7JSW|1|1|A|1913
7JSW|1|1|C|1914
7JSW|1|1|U|1915
7JSW|1|1|A|1916
7JSW|1|1|U|1917
7JSW|1|1|A|1918
7JSW|1|1|A|1919
7JSW|1|1|C|1920
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain 3
- Small subunit ribosomal RNA; SSU rRNA
- Chain 5
- Transfer RNA; tRNA
- Chain 8
- Peptidyl-tRNA hydrolase ArfB
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