HL_7K50_059

3D structure

PDB id

7K50 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation non-frameshifting(CCA-A) complex (Structure I)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

AGUUCAUAU

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7K50_059 not in the Motif Atlas

Homologous match to HL_7A0S_059

Geometric discrepancy: 0.1469

The information below is about HL_7A0S_059

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_32735.2

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

7K50|1|1|A|2471
7K50|1|1|G|2472
7K50|1|1|U|2473
7K50|1|1|U|2474
7K50|1|1|C|2475
7K50|1|1|A|2476
7K50|1|1|U|2477
7K50|1|1|A|2478
7K50|1|1|U|2479

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain 7

Transfer RNA; tRNA

Chain F

50S ribosomal protein L36

Chain f

50S ribosomal protein L6